Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | A9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1275333 bp
Thymine Count
1268716 bp
Guanine Count
1910030 bp
Cytosine Count
1922075 bp
Genome Length
6376154 bp
Protein-coding Genes
5599 genes
Non-Coding Genes
273 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | A9HBioS_5169 | Not Available | Negative | 5634760 - 5635239 | 18515.3 |
| efflux transporter rnd | A9HBioS_5170 | Not Available | Positive | 5635565 - 5636737 | 42128.4 |
| macb-like | A9HBioS_5171 | Not Available | Positive | 5636738 - 5638711 | 69664.5 |
| efflux transporter, outer membrane factor lipoprotein nodt | A9HBioS_5172 | Not Available | Positive | 5638719 - 5640119 | 50592.6 |
| hypothetical protein | A9HBioS_5173 | Not Available | Negative | 5640268 - 5641896 | 61561.6 |
| membrane dipeptidase | A9HBioS_5174 | Not Available | Positive | 5641965 - 5643485 | 55553.0 |
| tat (twin-arginine translocation) pathway signal sequence | A9HBioS_5175 | Not Available | Positive | 5643514 - 5644794 | 47939.3 |
| hypothetical protein | A9HBioS_5176 | Not Available | Positive | 5644827 - 5645720 | 32459.9 |
| cyclic peptide transporter | A9HBioS_5177 | Not Available | Positive | 5645940 - 5647589 | 60565.0 |
| tonb-dependent siderophore receptor | A9HBioS_5178 | Not Available | Positive | 5647771 - 5650236 | 89816.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
