Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | A9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1275333 bp
Thymine Count
1268716 bp
Guanine Count
1910030 bp
Cytosine Count
1922075 bp
Genome Length
6376154 bp
Protein-coding Genes
5599 genes
Non-Coding Genes
273 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic glycine betaine/choline-binding (lipo)protein of an abc-type transport system (osmoprotectant binding protein) | A9HBioS_2952 | Not Available | Positive | 3295803 - 3296696 | 33131.7 |
| abc-type proline/glycine betaine transport system permease component | A9HBioS_2953 | Not Available | Positive | 3296709 - 3297362 | 23114.6 |
| prov | A9HBioS_2954 | Not Available | Positive | 3297359 - 3298516 | 43128.1 |
| diaminopimelate decarboxylase | A9HBioS_2955 | Not Available | Positive | 3299168 - 3300331 | 43358.0 |
| hypothetical protein | A9HBioS_2956 | Not Available | Negative | 3300378 - 3301256 | 32921.8 |
| hypothetical protein | A9HBioS_2957 | Not Available | Negative | 3301304 - 3303520 | 82709.1 |
| sel1 | A9HBioS_2958 | Not Available | Negative | 3303729 - 3304484 | 27140.4 |
| putative iron-regulated protein | A9HBioS_2959 | Not Available | Negative | 3304481 - 3305161 | 25418.4 |
| tonb-dependent siderophore receptor | A9HBioS_2960 | Not Available | Positive | 3305369 - 3307627 | 81418.4 |
| flavodoxin | A9HBioS_2961 | Not Available | Positive | 3307794 - 3310364 | 94875.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
