Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | A9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1275333 bp
Thymine Count
1268716 bp
Guanine Count
1910030 bp
Cytosine Count
1922075 bp
Genome Length
6376154 bp
Protein-coding Genes
5599 genes
Non-Coding Genes
273 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pcaf: 3-oxoadipyl-coa thiolase | A9HBioS_2764 | Not Available | Positive | 3107500 - 3108702 | 41522.1 |
| protocatechuate 3,4-dioxygenase, beta subunit | A9HBioS_2765 | Not Available | Positive | 3108740 - 3109444 | 26338.1 |
| protocatechuate 3,4-dioxygenase, alpha subunit | A9HBioS_2766 | Not Available | Positive | 3109446 - 3110012 | 20684.3 |
| mfs transporter, metabolite:h+ symporter | A9HBioS_2767 | Not Available | Positive | 3110278 - 3111573 | 47183.4 |
| 3-carboxy-cis,cis-muconate cycloisomerase | A9HBioS_2768 | Not Available | Positive | 3111620 - 3112984 | 48188.1 |
| 3-oxoadipate enol-lactonase | A9HBioS_2769 | Not Available | Positive | 3112997 - 3113788 | 28290.8 |
| 4-carboxymuconolactone decarboxylase | A9HBioS_2770 | Not Available | Positive | 3113799 - 3114191 | 14687.5 |
| trans-aconitate methyltransferase | A9HBioS_2771 | Not Available | Negative | 3114296 - 3115114 | 31127.6 |
| hypothetical protein | A9HBioS_2772 | Not Available | Negative | 3115136 - 3115513 | 13059.8 |
| pyridine nucleotide-disulfide oxidoreductase | A9HBioS_2773 | Not Available | Negative | 3115540 - 3116730 | 43885.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
