Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | A9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1275333 bp
Thymine Count
1268716 bp
Guanine Count
1910030 bp
Cytosine Count
1922075 bp
Genome Length
6376154 bp
Protein-coding Genes
5599 genes
Non-Coding Genes
273 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| soxa: sarcosine oxidase, alpha subunit | A9HBioS_0735 | Not Available | Negative | 864008 - 867025 | 109229.0 |
| soxd: sarcosine oxidase, delta subunit | A9HBioS_0736 | Not Available | Negative | 867022 - 867351 | 12513.6 |
| soxb: sarcosine oxidase, beta subunit | A9HBioS_0737 | Not Available | Negative | 867366 - 868616 | 45256.0 |
| glycine/serine hydroxymethyltransferase | A9HBioS_0738 | Not Available | Negative | 868637 - 869890 | 44670.3 |
| trax protein | A9HBioS_0739 | Not Available | Negative | 870149 - 870859 | 26447.4 |
| threonine aldolase | A9HBioS_0740 | Not Available | Positive | 870986 - 872026 | 38246.2 |
| dehydrogenase | A9HBioS_0741 | Not Available | Positive | 872305 - 873129 | 29576.7 |
| flavodoxin reductase | A9HBioS_0742 | Not Available | Negative | 873251 - 874351 | 40519.6 |
| phenylpropionate dioxygenase | A9HBioS_0743 | Not Available | Positive | 874634 - 875929 | 48902.5 |
| electron transfer flavoprotein beta subunit | A9HBioS_0744 | Not Available | Negative | 876794 - 877564 | 26670.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
