Corynebacterium efficiens YS-314

Gram-positiveRodNon-motileFacultative aerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Coryneform bacteria are rod-shaped, fast growing, non-sporulating Gram-positive bacteria that enjoy widespread distribution. Corynebacteria are used commercially to produce amino acids. Since the discovery, in the 1950s, that these bacteria could produce large amounts of glutamic acid, researchers have genetically modified strains to increase their yields.Phylogenetic studies, based on 16S rDNA analysis, demonstrated that three strains formed a distinct cluster within the genus Corynebacterium, and that their nearest relatives were Corynebacterium glutamicum and Corynebacterium callunae, also known as glutamic-acid-producing species. The data from 16S rDNA sequence and DNA-DNA related studies clearly indicated that the three isolates represented a new species within the genus Corynebacterium. All of the isolates could grow at 45C and produced acid from dextrin. On the basis of this data it was proposed that the three glutamic-acid-producing isolates together be classified as Corynebacterium efficiens sp. nov.Worldwide there is a huge demand for Monosodium-glutamate (MSG) as a flavour enhancer, in 1996 worldwide production exceeded 1 million tonnes and much of it is produced using Corynebacterium. This causes a problem in that the amount of heat generated kills the bacterium unless complicated cooling systems are installed. In Japanese trials evidence has shown that C. efficiens can produce MSG at a temperature of 45C, this could result in more efficient and cheaper production. (From http://www.ebi.ac.uk/2can/genomes/bacteria.html) (BacMap)

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium efficiens
StrainYS-314

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Corynebacterium efficiens YS-314
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Corynebacterium efficiens YS-314 plasmid pCE2, complete sequence.

Gene Summary

Adenine Count

5508 bp

Thymine Count

5315 bp

Guanine Count

6813 bp

Cytosine Count

6107 bp

Genome Length

23743 bp

Protein-coding Genes

19 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
depupylase/deamidase dopCE_RS08095Not AvailableNegative1706165 - 170770956869.2
proteasome atpaseCE_RS08100Not AvailableNegative1707985 - 170955658054.5
trna (adenine-n1)-methyltransferaseCE_RS08105Not AvailableNegative1709607 - 171044331095.5
m18 family aminopeptidaseCE_RS08110Not AvailableNegative1710498 - 171176044707.7
recb family exonucleaseCE_RS08115Not AvailablePositive1711840 - 171270332918.4
higa family addiction module antitoxinCE_RS08120Not AvailablePositive1712925 - 17131648956.86
mfs transporterCE_RS08125Not AvailableNegative1713219 - 171446944526.5
marr family winged helix-turn-helix transcriptional regulatorCE_RS08130Not AvailablePositive1714559 - 171504418308.4
aspartate ammonia-lyaseCE_RS08135Not AvailableNegative1715046 - 171666258594.0
atp phosphoribosyltransferaseCE_RS08140Not AvailableNegative1716829 - 171767430108.0

Displaying genes 1661 – 1670 of 2959 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

13 records
Metabolite IDMetabolite nameStructureCAS number
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00032075-methyl-5,6,7,8-tetrahydromethanopterinC31H44N6O16PChemical structure of 5-methyl-5,6,7,8-tetrahydromethanopterinNot available
Average787.694Da
Monoisotopic787.2567871Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034704-(phosphooxy)-L-threonineC4H8NO7PChemical structure of 4-(phosphooxy)-L-threonineNot available
Average213.083Da
Monoisotopic213.0049358Da
BASm0003537(R)-3-hydroxy-2-oxo-4-phosphooxybutanoateC4H4O8PChemical structure of (R)-3-hydroxy-2-oxo-4-phosphooxybutanoateNot available
Average211.043Da
Monoisotopic210.9660248Da
BASm0003983di-trans,octa-cis-undecaprenyl phosphateC55H89O4PChemical structure of di-trans,octa-cis-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm0004072alpha-D-glucosyl di-trans,octa-cis-undecaprenyl diphosphateC61H100O12P2Chemical structure of alpha-D-glucosyl di-trans,octa-cis-undecaprenyl diphosphateNot available
Average1087.408Da
Monoisotopic1086.6701Da
BASm00041244-(gamma-L-glutamylamino)butanalC9H16N2O4Chemical structure of 4-(gamma-L-glutamylamino)butanalNot available
Average216.2343Da
Monoisotopic216.11100701Da

Displaying 1–10 of 13 metabolites

Health Effects

No health effects information available for this bacterium.