Pseudoalteromonas porphyrae str. UCD-SED14

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas porphyrae
StrainUCD-SED14

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas porphyrae strain UCD-SED14 scaffold_109, whole

Gene Summary

Adenine Count

1450507 bp

Thymine Count

1443429 bp

Guanine Count

965633 bp

Cytosine Count

952023 bp

Genome Length

4811718 bp

Protein-coding Genes

4023 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinADS77_07790Not AvailablePositive1806541 - 180727228108.6
hypothetical proteinADS77_07795Not AvailablePositive1807338 - 180833336941.4
hypothetical proteinADS77_07800Not AvailableNegative1808743 - 180987342052.9
sugar-binding proteinADS77_07810Not AvailableNegative1811017 - 181203938370.0
hypothetical proteinADS77_07815Not AvailablePositive1812378 - 181290219526.6
beti family transcriptional regulatorADS77_07820Not AvailablePositive1813647 - 181423722122.7
betaine-aldehyde dehydrogenaseADS77_07825Not AvailablePositive1814239 - 181570252721.7
choline dehydrogenaseADS77_07830Not AvailablePositive1815702 - 181737260946.3
choline transporterADS77_07835Not AvailablePositive1817786 - 181900345613.4
hypothetical proteinADS77_07840Not AvailablePositive1819046 - 181975325918.3

Displaying genes 1521 – 1530 of 4138 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.