Pseudoalteromonas porphyrae str. UCD-SED14

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas porphyrae
StrainUCD-SED14

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas porphyrae strain UCD-SED14 scaffold_109, whole

Gene Summary

Adenine Count

1450507 bp

Thymine Count

1443429 bp

Guanine Count

965633 bp

Cytosine Count

952023 bp

Genome Length

4811718 bp

Protein-coding Genes

4023 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
penicillinase repressorADS77_06595Not AvailablePositive1539944 - 154032114558.6
hypothetical proteinADS77_06605Not AvailablePositive1541802 - 154308847840.7
succinyl-coa:3-ketoacid-coa transferaseADS77_06610Not AvailableNegative1543221 - 154387723127.3
succinyl-coa:3-ketoacid-coa transferaseADS77_06615Not AvailableNegative1543890 - 154458825077.1
hydroxymethylglutaryl-coa lyaseADS77_06620Not AvailableNegative1544646 - 154555431890.3
3-methylcrotonyl-coa carboxylaseADS77_06625Not AvailableNegative1545547 - 154752371385.9
gamma-carboxygeranoyl-coa hydrataseADS77_06630Not AvailableNegative1547532 - 154830227855.7
methylcrotonoyl-coa carboxylaseADS77_06635Not AvailableNegative1548313 - 154993258569.5
isovaleryl-coa dehydrogenaseADS77_06640Not AvailableNegative1549944 - 155111942518.2
merr family transcriptional regulatorADS77_06645Not AvailableNegative1551184 - 155161816500.6

Displaying genes 1291 – 1300 of 4138 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.