Pseudoalteromonas porphyrae str. UCD-SED14

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas porphyrae
StrainUCD-SED14

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas porphyrae strain UCD-SED14 scaffold_109, whole

Gene Summary

Adenine Count

1450507 bp

Thymine Count

1443429 bp

Guanine Count

965633 bp

Cytosine Count

952023 bp

Genome Length

4811718 bp

Protein-coding Genes

4023 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonucleotide-diphosphate reductase subunit betaADS77_06395Not AvailableNegative1488314 - 148944443101.2
ribonucleotide-diphosphate reductase subunit alphaADS77_06400Not AvailableNegative1489514 - 149179685724.6
haloacid dehalogenaseADS77_06405Not AvailableNegative1492177 - 149286024234.8
3-demethylubiquinone-9 3-methyltransferaseADS77_06410Not AvailableNegative1492860 - 149357026132.4
dna gyrase subunit aADS77_06415Not AvailablePositive1493750 - 149644699973.1
phosphohydroxythreonine aminotransferaseADS77_06420Not AvailablePositive1496577 - 149765940183.1
3-phosphoshikimate 1-carboxyvinyltransferaseADS77_06425Not AvailablePositive1497659 - 149893645488.0
cytidylate kinaseADS77_06430Not AvailablePositive1499044 - 149975425653.8
30s ribosomal protein s1ADS77_06435Not AvailablePositive1499850 - 150151761042.5
integration host factor subunit betaADS77_06440Not AvailablePositive1501580 - 150186710575.5

Displaying genes 1251 – 1260 of 4138 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.