Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Roseibium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Roseibium |
| Species | Roseibium aggregatum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | PHB film surface suspended in the water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1379432 bp
Thymine Count
1375544 bp
Guanine Count
1967935 bp
Cytosine Count
1972384 bp
Genome Length
6696127 bp
Protein-coding Genes
6153 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | LAL4801_05856 | P50360 | Positive | 6287246 - 6288883 | 60801.5 |
| plasmid pria4b orf-3-like protein | LAL4801_05857 | Not Available | Positive | 6288880 - 6289494 | 23747.0 |
| aliphatic nitrilase | LAL4801_05858 | Q03217 | Negative | 6289628 - 6290704 | 38864.9 |
| hth-type transcriptional regulator gltr | LAL4801_05859 | Not Available | Negative | 6290808 - 6291719 | 34122.0 |
| pantothenate permease | LAL4801_05860 | Q4L7L6 | Negative | 6291841 - 6293340 | 54406.4 |
| hypothetical protein | LAL4801_05861 | Not Available | Negative | 6293337 - 6293657 | 11758.3 |
| hypothetical protein | LAL4801_05862 | Not Available | Positive | 6294154 - 6294417 | 9461.62 |
| putative gamma-glutamyltransferase ywrd | LAL4801_05863 | O05218 | Negative | 6294848 - 6296440 | 55523.4 |
| putative d,d-dipeptide transport atp-binding protein ddpf | LAL4801_05864 | P45094 | Negative | 6296442 - 6297548 | 39350.2 |
| putative d,d-dipeptide transport atp-binding protein ddpd | LAL4801_05865 | Not Available | Negative | 6297545 - 6298534 | 35204.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.