Alkalilimnicola ehrlichii MLHE-1

Gram-negativeFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Alkalilimnicola

Description

Alkalilimnicola ehrlichii MLHE-1. This chemoautotrophic strain was isolated from Mono Lake in California, which contains arsenic and has high pH and salt concentrations. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusAlkalilimnicola
SpeciesAlkalilimnicola ehrlichii
StrainMLHE

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAquatic
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alkalilimnicola ehrlichii MLHE-1, complete sequence.

Gene Summary

Adenine Count

533858 bp

Thymine Count

529800 bp

Guanine Count

1106608 bp

Cytosine Count

1105678 bp

Genome Length

3275944 bp

Protein-coding Genes

2902 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hcp family type vi secretion system effectorMLG_RS00295Not AvailablePositive65285 - 6580318856.2
type vi secretion system paar proteinMLG_RS00300Not AvailablePositive65890 - 661899855.79
hypothetical proteinMLG_RS00305Not AvailablePositive66332 - 6693122565.7
diaminopimelate epimeraseMLG_RS00310Not AvailablePositive67016 - 6785530482.5
duf484 family proteinMLG_RS00315Not AvailablePositive67913 - 6861125605.9
tyrosine recombinase xercMLG_RS00320Not AvailablePositive68618 - 6953233466.0
tetr/acrr family transcriptional regulatorMLG_RS00325Not AvailablePositive69593 - 7022523338.9
mdr family oxidoreductaseMLG_RS00330Not AvailablePositive70272 - 7125234199.2
atp-dependent protease subunit hslvMLG_RS00335Not AvailablePositive71434 - 7198519824.7
atp-dependent protease atpase subunit hsluMLG_RS00340Not AvailablePositive72000 - 7332249505.4

Displaying genes 71 – 80 of 2965 in total

Metabolites

1813 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da

Displaying 1–10 of 1813 metabolites

Health Effects

No health effects information available for this bacterium.