Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | CFIA1033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1139914 bp
Thymine Count
1153128 bp
Guanine Count
1220949 bp
Cytosine Count
1190224 bp
Genome Length
4706268 bp
Protein-coding Genes
3861 genes
Non-Coding Genes
167 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | IW01_01550 | Not Available | Positive | 330024 - 331148 | 41863.5 |
| hypothetical protein | IW01_01555 | Not Available | Positive | 331184 - 331831 | 23143.4 |
| hypothetical protein | IW01_01560 | Not Available | Positive | 331855 - 332091 | 8985.59 |
| 3-oxoacyl-acp reductase | IW01_01565 | Not Available | Positive | 332101 - 332844 | 26525.4 |
| 3-oxoacyl-acp reductase | IW01_01570 | Not Available | Positive | 332858 - 333601 | 26751.8 |
| amp-dependent synthetase | IW01_01575 | Not Available | Positive | 333633 - 335045 | 52224.9 |
| acyl-protein synthetase | IW01_01580 | Not Available | Positive | 335032 - 336114 | 40374.9 |
| hypothetical protein | IW01_01585 | Not Available | Positive | 336098 - 337297 | 44811.1 |
| hypothetical protein | IW01_01590 | Not Available | Positive | 337399 - 338067 | 25817.9 |
| hypothetical protein | IW01_01595 | Not Available | Positive | 338067 - 339458 | 51381.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
