Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Alicycliphilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Alicycliphilus |
| Species | Alicycliphilus denitrificans |
| Strain | BQ1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722073 bp
Thymine Count
727118 bp
Guanine Count
1616293 bp
Cytosine Count
1613483 bp
Genome Length
4678967 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CE154_006555 | Not Available | Positive | 1385728 - 1386654 | 33981.2 |
| iron uptake protein | CE154_006560 | Not Available | Positive | 1386771 - 1387073 | 10435.2 |
| pepsy domain-containing protein | CE154_006565 | Not Available | Positive | 1387089 - 1388762 | 61766.3 |
| duf3325 family protein | CE154_006570 | Not Available | Positive | 1388755 - 1389087 | 11482.4 |
| duf3016 domain-containing protein | CE154_006575 | Not Available | Negative | 1389106 - 1389627 | 19217.0 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | CE154_006580 | Not Available | Negative | 1389710 - 1390570 | 30742.1 |
| 2-methylaconitate cis-trans isomerase prpf | CE154_006585 | Not Available | Negative | 1390567 - 1391745 | 40829.9 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | CE154_006590 | Not Available | Negative | 1391773 - 1394367 | 94546.0 |
| 2-methylcitrate synthase | CE154_006595 | Not Available | Negative | 1394392 - 1395552 | 42426.8 |
| acyl-coa thioesterase | CE154_006600 | Not Available | Negative | 1395549 - 1395944 | 13592.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
