Desulfotalea psychrophila LSv54

Gram-negativeRodMotileAnaerobe

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobulbia

Order

Desulfobulbales

Family

Desulfocapsaceae

Genus

Desulfotalea

Description

Desulfotalea psychrophila is a marine Gram-negative sulfate-reducing bacterium. It was isolated from permanently cold Arctic sediments off the coast of Svalbard. Its optimal growth temperature is 10 degrees Celsius but it is also able to grow at temperatures as low as -1.8 degrees Celsius. Psychrophilic sulfate-reducing bacteria are assumed to contribute significantly to the carbon and sulfur cycles.(From http://www.expasy.org/sprot/hamap/DESPS.html) (BacMap)

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobulbia
OrderDesulfobulbales
FamilyDesulfocapsaceae
GenusDesulfotalea
SpeciesDesulfotalea psychrophila
StrainLSv54

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Desulfotalea psychrophila LSv54
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature7
Temperature rangePsychrophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Desulfotalea psychrophila LSv54 plasmid small, complete sequence.

Gene Summary

Adenine Count

5390 bp

Thymine Count

5086 bp

Guanine Count

2109 bp

Cytosine Count

2079 bp

Genome Length

14664 bp

Protein-coding Genes

17 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endonucleaseDP_RS01450Not AvailablePositive318719 - 31947729070.9
chase3 domain-containing proteinDP_RS01455Not AvailableNegative319626 - 32183079438.4
lysr family transcriptional regulatorDP_RS01460Not AvailableNegative322157 - 32301732124.2
antibiotic biosynthesis monooxygenase family proteinDP_RS01470Not AvailablePositive323375 - 32371913569.3
lipoyl synthaseDP_RS01475Not AvailableNegative323802 - 32470133579.5
lipoyl(octanoyl) transferase lipbDP_RS01480Not AvailableNegative324719 - 32539024577.7
aminomethyl-transferring glycine dehydrogenase subunit gcvpbDP_RS01485Not AvailableNegative325440 - 32689452720.2
aminomethyl-transferring glycine dehydrogenase subunit gcvpaDP_RS01490Not AvailableNegative326897 - 32824949376.3
glycine cleavage system protein gcvhDP_RS01495Not AvailableNegative328362 - 32875714393.8
aminomethyltransferase family proteinDP_RS01500Not AvailableNegative328794 - 33008346545.7

Displaying genes 351 – 360 of 3154 in total

Metabolites

1639 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001462ubiquinone-0C9H10O4Chemical structure of ubiquinone-0605-94-7
Average182.1733Da
Monoisotopic182.057908808Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm00016962-heptyl-3-hydroxy-4(1H)-quinoloneC16H21NO2Chemical structure of 2-heptyl-3-hydroxy-4(1H)-quinoloneNot available
Average259.349Da
Monoisotopic259.15722892Da

Displaying 1–10 of 1639 metabolites

Health Effects

No health effects information available for this bacterium.