Vibrio neptunius

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio neptunius
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio neptunius
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Penaeus vannamei
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio neptunius strain S2394 contig0176, whole genome shotgun

Gene Summary

Adenine Count

1438928 bp

Thymine Count

1422932 bp

Guanine Count

1156527 bp

Cytosine Count

1183612 bp

Genome Length

5201999 bp

Protein-coding Genes

4521 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinTW84_00315Not AvailableNegative84171 - 8474922443.0
type iii secretion protein ssajTW84_00320D0ZWT5Negative84752 - 8548026642.8
atp-dependent helicase hrpbTW84_00325Not AvailableNegative85477 - 8578210859.0
type iii secretion system proteinTW84_00330Not AvailableNegative85760 - 8607711219.2
type iii secretion system needle protein ssagTW84_00335Not AvailableNegative86074 - 862897847.47
arac family transcriptional regulatorTW84_00340P26993Negative86299 - 8700026998.4
hypothetical proteinTW84_00345Not AvailablePositive87281 - 8830337958.0
hypothetical proteinTW84_00350F2WP51Positive88558 - 9051373138.5
hypothetical proteinTW84_00355Not AvailablePositive90523 - 9099017122.5
membrane-bound metal-dependent hydrolaseTW84_00360Not AvailableNegative91081 - 9208237943.9

Displaying genes 81 – 90 of 4602 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

225 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000538D-arabinonateC5H9O6Chemical structure of D-arabinonateNot available
Average165.122Da
Monoisotopic165.04046159Da

Displaying 1–10 of 225 metabolites

Health Effects

No health effects information available for this bacterium.