Colwellia psychrerythraea 34H

Gram-negativeRodMotileFacultatively anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Colwelliaceae

Genus

Colwellia

Description

Colwellia psychrerythraea has been isolated from Arctic marine sediments. Maximum cell yield is achieved at subzero temperature (-1 degree Celsius). Cells continue to swim in sugar solutions down to -10 degrees Celsius and they can grow under deep-sea pressures. It produces cold-active enzymes with low temperature optima for activity and marked heat instability. (HAMAP: COLP3)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyColwelliaceae
GenusColwellia
SpeciesColwellia psychrerythraea
Strain34H

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Colwellia psychrerythraea 34H
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultatively anaerobe
Optimal temperature8
Temperature rangePsychrophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Colwellia psychrerythraea 34H, complete sequence.

Gene Summary

Adenine Count

1667446 bp

Thymine Count

1663634 bp

Guanine Count

1022986 bp

Cytosine Count

1019114 bp

Genome Length

5373180 bp

Protein-coding Genes

4457 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acyl-d-amino-acid deacylase family proteinCPS_RS11995Not AvailableNegative2799533 - 280110457167.3
m14 family metallopeptidaseCPS_RS12000Not AvailableNegative2801113 - 280240248620.3
tonb-dependent receptor domain-containing proteinCPS_RS12005Not AvailableNegative2802493 - 2805528109024.0
nad-glutamate dehydrogenaseCPS_RS12010Not AvailableNegative2805911 - 2810656177681.0
orn/dap/arg decarboxylaseCPS_RS12020Not AvailablePositive2811014 - 281229146523.8
sodium/glutamate symporterCPS_RS12025Not AvailablePositive2812421 - 281363243383.4
na+/h+ antiporter nhac family proteinCPS_RS24260Not AvailablePositive2813919 - 281552058129.0
na+/h+ antiporter nhac family proteinCPS_RS24265Not AvailablePositive2815499 - 28156394915.02
lysr family transcriptional regulatorCPS_RS12035Not AvailablePositive2815718 - 281660833136.9
thioredoxin domain-containing proteinCPS_RS12040Not AvailableNegative2816715 - 281735623579.4

Displaying genes 2421 – 2430 of 4577 in total

Metabolites

1857 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da

Displaying 1–10 of 1857 metabolites

Health Effects

No health effects information available for this bacterium.