Pseudomonas lini

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Pseudomonas lini strain DSM 16768 chromosome I.

Adenine Count

1346483 bp

Thymine Count

1344826 bp

Guanine Count

1922059 bp

Cytosine Count

1916368 bp

Genome Length

6529836 bp

Protein-coding Genes

5753 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
tigr01841 family phasin	BLU65_RS20285	Not Available	Negative	4465166 - 4465735	20061.4
duf3141 domain-containing protein	BLU65_RS20290	Not Available	Positive	4465990 - 4468467	91399.4
arac family transcriptional regulator	BLU65_RS20295	Not Available	Negative	4468493 - 4469530	38631.0
acetoacetyl-coa reductase	BLU65_RS20300	Not Available	Positive	4469787 - 4470533	26464.6
acetyl-coa c-acetyltransferase	BLU65_RS20305	Not Available	Positive	4470591 - 4471769	40601.9
class i poly(r)-hydroxyalkanoic acid synthase	BLU65_RS20310	Not Available	Positive	4471857 - 4473557	63899.8
lrp/asnc family transcriptional regulator	BLU65_RS20315	Not Available	Negative	4473626 - 4474126	18819.6
histone deacetylase family protein	BLU65_RS20320	Not Available	Positive	4474247 - 4475281	37916.6
ornithine cyclodeaminase	BLU65_RS20325	Not Available	Positive	4475335 - 4476405	38809.1
amino acid permease	BLU65_RS20330	Not Available	Positive	4476578 - 4477984	50848.3

Displaying genes 4071 – 4080 of 5930 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0001865	diphosphateHO7P2	Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0003208	L-2-acetamido-6-oxoheptanedioateC9H11NO6	Not available	Average229.189Da Monoisotopic229.059734238Da
BASm0003389	NADP(+)C21H25N7O17P3	Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003631	(1R,6R)-6-hydroxy-2-succinyl-cyclohexa-2,4-diene-1-carboxylateC11H10O6	Not available	Average238.196Da Monoisotopic238.0488352Da
BASm0003696	N-acetyl-(2S,6S)-2,6-diaminoheptanedioateC9H15N2O5	Not available	Average231.229Da Monoisotopic231.098645171Da
BASm0003736	5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylateC14H13O9	Not available	Average325.251Da Monoisotopic325.057602738Da
BASm0003784	1,4-dihydroxy-2-naphthoyl-CoAC32H38N7O19P3S	Not available	Average949.67Da Monoisotopic949.117798519Da
BASm0006855	(R)-lipoateC8H14O2S2	`1200-22-2`	Average206.326Da Monoisotopic206.0435211Da
BASm0007001	UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamateC28H39N5O23P2	Not available	Average875.582Da Monoisotopic875.1533009Da
BASm0007002	UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysineC34H52N7O24P2	Not available	Average1004.764Da Monoisotopic1004.25554Da