Pseudomonas lini

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Pseudomonas lini strain DSM 16768 chromosome I.

Adenine Count

1346483 bp

Thymine Count

1344826 bp

Guanine Count

1922059 bp

Cytosine Count

1916368 bp

Genome Length

6529836 bp

Protein-coding Genes

5753 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
tetr/acrr family transcriptional regulator	BLU65_RS16070	Not Available	Negative	3539192 - 3539830	22845.3
nad(p)h-dependent oxidoreductase	BLU65_RS16075	Not Available	Positive	3539931 - 3540584	23698.0
class i sam-dependent methyltransferase	BLU65_RS16080	Not Available	Negative	3540932 - 3541870	34830.8
response regulator	BLU65_RS16085	Not Available	Positive	3542074 - 3542481	14608.6
had-ia family hydrolase	BLU65_RS16090	Not Available	Positive	3542613 - 3543281	23550.2
pyridoxal-phosphate dependent enzyme	BLU65_RS16095	Not Available	Positive	3543553 - 3544485	32609.6
duf2388 domain-containing protein	BLU65_RS16100	Not Available	Negative	3544555 - 3544851	10420.5
is66 family transposase	BLU65_RS16105	Not Available	Negative	3544953 - 3545192	8884.22
na/pi cotransporter family protein	BLU65_RS16110	Not Available	Negative	3545266 - 3546942	59694.6
magnesium-translocating p-type atpase	BLU65_RS16115	Not Available	Negative	3547166 - 3549886	100096.0

Displaying genes 3311 – 3320 of 5930 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0001865	diphosphateHO7P2	Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0003208	L-2-acetamido-6-oxoheptanedioateC9H11NO6	Not available	Average229.189Da Monoisotopic229.059734238Da
BASm0003389	NADP(+)C21H25N7O17P3	Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003631	(1R,6R)-6-hydroxy-2-succinyl-cyclohexa-2,4-diene-1-carboxylateC11H10O6	Not available	Average238.196Da Monoisotopic238.0488352Da
BASm0003696	N-acetyl-(2S,6S)-2,6-diaminoheptanedioateC9H15N2O5	Not available	Average231.229Da Monoisotopic231.098645171Da
BASm0003736	5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylateC14H13O9	Not available	Average325.251Da Monoisotopic325.057602738Da
BASm0003784	1,4-dihydroxy-2-naphthoyl-CoAC32H38N7O19P3S	Not available	Average949.67Da Monoisotopic949.117798519Da
BASm0006855	(R)-lipoateC8H14O2S2	`1200-22-2`	Average206.326Da Monoisotopic206.0435211Da
BASm0007001	UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamateC28H39N5O23P2	Not available	Average875.582Da Monoisotopic875.1533009Da
BASm0007002	UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysineC34H52N7O24P2	Not available	Average1004.764Da Monoisotopic1004.25554Da