Pseudomonas lini

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Pseudomonas lini strain DSM 16768 chromosome I.

Adenine Count

1346483 bp

Thymine Count

1344826 bp

Guanine Count

1922059 bp

Cytosine Count

1916368 bp

Genome Length

6529836 bp

Protein-coding Genes

5753 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
sulfite exporter taue/safe family protein	BLU65_RS13610	Not Available	Positive	2995799 - 2996548	26355.2
lysr substrate-binding domain-containing protein	BLU65_RS13615	Not Available	Negative	2996538 - 2997392	31978.8
duf1127 domain-containing protein	BLU65_RS13620	Not Available	Positive	2997489 - 2997704	8394.87
is66 family transposase	BLU65_RS13625	Not Available	Positive	2997769 - 2998997	46864.2
class ii 3-deoxy-7-phosphoheptulonate synthase	BLU65_RS13630	Not Available	Negative	2999114 - 3000460	49964.3
spermidine synthase	BLU65_RS13635	Not Available	Positive	3000624 - 3001379	28014.6
crotonase/enoyl-coa hydratase family protein	BLU65_RS13640	Not Available	Negative	3001490 - 3002281	28250.0
dead/deah box helicase	BLU65_RS13650	Not Available	Positive	3002714 - 3004387	60689.6
doda-type extradiol aromatic ring-opening family dioxygenase	BLU65_RS13655	Not Available	Negative	3004603 - 3005370	27675.0
thiopurine s-methyltransferase	BLU65_RS13660	Not Available	Positive	3005474 - 3006130	24759.4

Displaying genes 2821 – 2830 of 5930 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0001865	diphosphateHO7P2	Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0003208	L-2-acetamido-6-oxoheptanedioateC9H11NO6	Not available	Average229.189Da Monoisotopic229.059734238Da
BASm0003389	NADP(+)C21H25N7O17P3	Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003631	(1R,6R)-6-hydroxy-2-succinyl-cyclohexa-2,4-diene-1-carboxylateC11H10O6	Not available	Average238.196Da Monoisotopic238.0488352Da
BASm0003696	N-acetyl-(2S,6S)-2,6-diaminoheptanedioateC9H15N2O5	Not available	Average231.229Da Monoisotopic231.098645171Da
BASm0003736	5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylateC14H13O9	Not available	Average325.251Da Monoisotopic325.057602738Da
BASm0003784	1,4-dihydroxy-2-naphthoyl-CoAC32H38N7O19P3S	Not available	Average949.67Da Monoisotopic949.117798519Da
BASm0006855	(R)-lipoateC8H14O2S2	`1200-22-2`	Average206.326Da Monoisotopic206.0435211Da
BASm0007001	UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamateC28H39N5O23P2	Not available	Average875.582Da Monoisotopic875.1533009Da
BASm0007002	UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysineC34H52N7O24P2	Not available	Average1004.764Da Monoisotopic1004.25554Da