Pseudomonas lini

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Pseudomonas lini strain DSM 16768 chromosome I.

Adenine Count

1346483 bp

Thymine Count

1344826 bp

Guanine Count

1922059 bp

Cytosine Count

1916368 bp

Genome Length

6529836 bp

Protein-coding Genes

5753 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
chaperonin groel	BLU65_RS11405	Not Available	Positive	2496055 - 2497698	57178.2
phosphatase pap2 family protein	BLU65_RS11410	Not Available	Negative	2497902 - 2498645	27607.0
two-component system response regulator colr	BLU65_RS11415	Not Available	Positive	2498864 - 2499547	25405.8
sensor histidine kinase	BLU65_RS11420	Not Available	Positive	2499537 - 2500817	47515.5
class i sam-dependent methyltransferase	BLU65_RS11425	Not Available	Positive	2500964 - 2501632	25777.1
lipopolysaccharide kinase inaa family protein	BLU65_RS11430	Not Available	Positive	2501637 - 2502350	27310.7
hypothetical protein	BLU65_RS11435	Not Available	Positive	2502353 - 2502580	8002.82
multidrug efflux rnd transporter permease subunit	BLU65_RS11440	Not Available	Negative	2502786 - 2505812	109744.0
efflux rnd transporter periplasmic adaptor subunit	BLU65_RS11445	Not Available	Negative	2505826 - 2506974	41031.0
duf1513 domain-containing protein	BLU65_RS11450	Not Available	Negative	2507181 - 2508278	39877.7

Displaying genes 2381 – 2390 of 5930 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0001865	diphosphateHO7P2	Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0003208	L-2-acetamido-6-oxoheptanedioateC9H11NO6	Not available	Average229.189Da Monoisotopic229.059734238Da
BASm0003389	NADP(+)C21H25N7O17P3	Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003631	(1R,6R)-6-hydroxy-2-succinyl-cyclohexa-2,4-diene-1-carboxylateC11H10O6	Not available	Average238.196Da Monoisotopic238.0488352Da
BASm0003696	N-acetyl-(2S,6S)-2,6-diaminoheptanedioateC9H15N2O5	Not available	Average231.229Da Monoisotopic231.098645171Da
BASm0003736	5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylateC14H13O9	Not available	Average325.251Da Monoisotopic325.057602738Da
BASm0003784	1,4-dihydroxy-2-naphthoyl-CoAC32H38N7O19P3S	Not available	Average949.67Da Monoisotopic949.117798519Da
BASm0006855	(R)-lipoateC8H14O2S2	`1200-22-2`	Average206.326Da Monoisotopic206.0435211Da
BASm0007001	UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamateC28H39N5O23P2	Not available	Average875.582Da Monoisotopic875.1533009Da
BASm0007002	UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysineC34H52N7O24P2	Not available	Average1004.764Da Monoisotopic1004.25554Da