Pseudomonas lini

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Pseudomonas lini strain DSM 16768 chromosome I.

Adenine Count

1346483 bp

Thymine Count

1344826 bp

Guanine Count

1922059 bp

Cytosine Count

1916368 bp

Genome Length

6529836 bp

Protein-coding Genes

5753 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
hypothetical protein	BLU65_RS07375	Not Available	Positive	1631593 - 1631814	7840.37
mlic family protein	BLU65_RS07380	Not Available	Positive	1631871 - 1632203	12113.4
class ii fructose-bisphosphate aldolase	BLU65_RS07385	Not Available	Positive	1632491 - 1633555	38472.0
helix-turn-helix transcriptional regulator	BLU65_RS07390	Not Available	Positive	1633716 - 1633967	9346.38
type ii toxin-antitoxin system hipa family toxin	BLU65_RS07395	Not Available	Positive	1633960 - 1635231	47069.4
polysaccharide lyase family 7 protein	BLU65_RS07400	Not Available	Negative	1636245 - 1636913	24849.1
putative bifunctional diguanylate cyclase/phosphodiesterase	BLU65_RS07405	Not Available	Positive	1637230 - 1639353	79272.6
m48 family metallopeptidase	BLU65_RS07410	Not Available	Positive	1639399 - 1639890	18935.9
helix-turn-helix domain-containing protein	BLU65_RS07415	Not Available	Positive	1640000 - 1640296	11250.4
gnat family n-acetyltransferase	BLU65_RS07420	Not Available	Negative	1640414 - 1640869	17106.6

Displaying genes 1581 – 1590 of 5930 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0001865	diphosphateHO7P2	Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0003208	L-2-acetamido-6-oxoheptanedioateC9H11NO6	Not available	Average229.189Da Monoisotopic229.059734238Da
BASm0003389	NADP(+)C21H25N7O17P3	Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003631	(1R,6R)-6-hydroxy-2-succinyl-cyclohexa-2,4-diene-1-carboxylateC11H10O6	Not available	Average238.196Da Monoisotopic238.0488352Da
BASm0003696	N-acetyl-(2S,6S)-2,6-diaminoheptanedioateC9H15N2O5	Not available	Average231.229Da Monoisotopic231.098645171Da
BASm0003736	5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylateC14H13O9	Not available	Average325.251Da Monoisotopic325.057602738Da
BASm0003784	1,4-dihydroxy-2-naphthoyl-CoAC32H38N7O19P3S	Not available	Average949.67Da Monoisotopic949.117798519Da
BASm0006855	(R)-lipoateC8H14O2S2	`1200-22-2`	Average206.326Da Monoisotopic206.0435211Da
BASm0007001	UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamateC28H39N5O23P2	Not available	Average875.582Da Monoisotopic875.1533009Da
BASm0007002	UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysineC34H52N7O24P2	Not available	Average1004.764Da Monoisotopic1004.25554Da