Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium larrymoorei |
| Strain | CFBP5473 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ficus benjamina, Ficus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium larrymoorei strain CFBP5473 chromosome linear,
Gene Summary
Adenine Count
323092 bp
Thymine Count
316854 bp
Guanine Count
419953 bp
Cytosine Count
429585 bp
Genome Length
1489484 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | CFBP5473_RS22640 | Not Available | Negative | 324571 - 325452 | 33225.1 |
| helix-turn-helix domain-containing protein | CFBP5473_RS22645 | Not Available | Positive | 325666 - 326586 | 35072.3 |
| trap transporter large permease | CFBP5473_RS22650 | Not Available | Negative | 326626 - 327906 | 44992.2 |
| trap transporter small permease | CFBP5473_RS22655 | Not Available | Negative | 327906 - 328427 | 18991.7 |
| trap transporter substrate-binding protein | CFBP5473_RS22660 | Not Available | Negative | 328503 - 329480 | 36050.4 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | CFBP5473_RS22665 | Not Available | Negative | 329898 - 330641 | 25949.9 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | CFBP5473_RS22670 | Not Available | Negative | 330638 - 331462 | 30383.1 |
| cupin domain-containing protein | CFBP5473_RS22675 | Not Available | Positive | 331605 - 331919 | 11620.8 |
| fumarylacetoacetate hydrolase family protein | CFBP5473_RS22680 | Not Available | Negative | 332010 - 332327 | 11547.0 |
| hypothetical protein | CFBP5473_RS25455 | Not Available | Negative | 332290 - 332853 | 20594.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
