Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium larrymoorei |
| Strain | CFBP5473 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ficus benjamina, Ficus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium larrymoorei strain CFBP5473 chromosome linear,
Gene Summary
Adenine Count
323092 bp
Thymine Count
316854 bp
Guanine Count
419953 bp
Cytosine Count
429585 bp
Genome Length
1489484 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rap1a/tai family immunity protein | CFBP5473_RS15365 | Not Available | Negative | 217944 - 218354 | 14617.6 |
| hcp family type vi secretion system effector | CFBP5473_RS15370 | Not Available | Negative | 218475 - 218951 | 17314.2 |
| type vi secretion system atpase tssh | CFBP5473_RS15375 | Not Available | Negative | 218998 - 221661 | 96179.4 |
| type vi secretion system protein tssa | CFBP5473_RS15380 | Not Available | Positive | 221882 - 222940 | 38924.7 |
| type vi secretion system contractile sheath small subunit | CFBP5473_RS15385 | Not Available | Positive | 223007 - 223516 | 19075.9 |
| type vi secretion system contractile sheath large subunit | CFBP5473_RS15390 | Not Available | Positive | 223610 - 225091 | 55134.2 |
| type vi secretion system contractile sheath large subunit | CFBP5473_RS15395 | Not Available | Positive | 225146 - 226540 | 51368.7 |
| type vi secretion system accessory protein tagj | CFBP5473_RS15400 | Not Available | Positive | 226537 - 227364 | 30207.6 |
| type vi secretion system baseplate subunit tsse | CFBP5473_RS15405 | Not Available | Positive | 227357 - 227866 | 19203.2 |
| type vi secretion system baseplate subunit tssf | CFBP5473_RS15410 | Not Available | Positive | 227859 - 229643 | 66182.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
