Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium larrymoorei |
| Strain | CFBP5473 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ficus benjamina, Ficus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium larrymoorei str. CFBP5473
Gene Summary
Adenine Count
323092 bp
Thymine Count
316854 bp
Guanine Count
419953 bp
Cytosine Count
429585 bp
Genome Length
1489484 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit chi | CFBP5473_RS09815 | Not Available | Negative | 2043545 - 2043994 | 16818.7 |
| leucyl aminopeptidase | CFBP5473_RS09820 | Not Available | Negative | 2044024 - 2045514 | 52042.6 |
| lptf/lptg family permease | CFBP5473_RS09825 | Not Available | Positive | 2045809 - 2046978 | 42676.3 |
| lps export abc transporter permease lptg | CFBP5473_RS09830 | Not Available | Positive | 2046975 - 2048063 | 39602.5 |
| lps-assembly protein lptd | CFBP5473_RS09835 | Not Available | Positive | 2048063 - 2050423 | 87633.9 |
| peptidylprolyl isomerase | CFBP5473_RS09840 | Not Available | Positive | 2050727 - 2051668 | 34834.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | CFBP5473_RS09845 | Not Available | Positive | 2051774 - 2052790 | 35399.0 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | CFBP5473_RS09850 | Not Available | Positive | 2052790 - 2053620 | 30293.0 |
| type ii toxin-antitoxin system trna(fmet)-specific endonuclease vapc | CFBP5473_RS09855 | Not Available | Negative | 2053637 - 2054035 | 14863.0 |
| type ii toxin-antitoxin system vapb family antitoxin | CFBP5473_RS09860 | Not Available | Negative | 2054035 - 2054268 | 8713.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
