Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium larrymoorei |
| Strain | CFBP5473 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ficus benjamina, Ficus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium larrymoorei strain CFBP5473 chromosome linear,
Gene Summary
Adenine Count
323092 bp
Thymine Count
316854 bp
Guanine Count
419953 bp
Cytosine Count
429585 bp
Genome Length
1489484 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase accessory protein xdhc | CFBP5473_RS03880 | Not Available | Negative | 828839 - 829666 | 29118.4 |
| xanthine dehydrogenase molybdopterin binding subunit | CFBP5473_RS03885 | Not Available | Negative | 829676 - 832015 | 85577.6 |
| xanthine dehydrogenase small subunit | CFBP5473_RS03895 | Not Available | Negative | 832202 - 833668 | 53143.8 |
| 3-hydroxybutyrate dehydrogenase | CFBP5473_RS03900 | Not Available | Negative | 833691 - 834467 | 27441.9 |
| glycerol kinase glpk | CFBP5473_RS03905 | Not Available | Positive | 834639 - 836132 | 54618.3 |
| srpbcc family protein | CFBP5473_RS03910 | Not Available | Positive | 836199 - 836666 | 17432.5 |
| llm class flavin-dependent oxidoreductase | CFBP5473_RS03915 | Not Available | Positive | 837173 - 838234 | 38691.3 |
| type i methionyl aminopeptidase | CFBP5473_RS03920 | Not Available | Positive | 838280 - 839032 | 27054.2 |
| peptide antibiotic transporter sbma | CFBP5473_RS03925 | Not Available | Positive | 839220 - 840491 | 48961.6 |
| is110 family transposase | CFBP5473_RS03930 | Not Available | Positive | 841423 - 842361 | 34352.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
