Samsonia erythrinae str. DSM 16730

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Samsonia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusSamsonia
SpeciesSamsonia erythrinae
StrainDSM 16730

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Samsonia erythrinae strain DSM 16730 Ga0244673_131, whole genome

Gene Summary

Adenine Count

909199 bp

Thymine Count

918874 bp

Guanine Count

1038655 bp

Cytosine Count

1012183 bp

Genome Length

3879021 bp

Protein-coding Genes

3424 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent malic enzymeEDC54_101785Not AvailableNegative870078 - 87177562796.1
cytidine deaminaseEDC54_101786Not AvailableNegative871984 - 87288032208.3
putative murein hydrolase (tigr00659 family)EDC54_101787Not AvailableNegative873039 - 87374025036.6
holin-like proteinEDC54_101788Not AvailableNegative873740 - 87414715129.3
adenosylmethionine-8-amino-7-oxononanoate aminotransferaseEDC54_101789Not AvailableNegative874446 - 87575048164.1
biotin synthaseEDC54_101790Not AvailablePositive875846 - 87688338799.6
8-amino-7-oxononanoate synthaseEDC54_101791Not AvailablePositive876923 - 87808042305.8
pimeloyl-coa biosynthesis protein biocEDC54_101792Not AvailablePositive878061 - 87882228113.6
dethiobiotin synthaseEDC54_101793Not AvailablePositive878833 - 87950724483.6
excinuclease abc subunit bEDC54_101794Not AvailablePositive880461 - 88247375921.3

Displaying genes 891 – 900 of 3588 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.