Samsonia erythrinae str. DSM 16730

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Samsonia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusSamsonia
SpeciesSamsonia erythrinae
StrainDSM 16730

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Samsonia erythrinae strain DSM 16730 Ga0244673_131, whole genome

Gene Summary

Adenine Count

909199 bp

Thymine Count

918874 bp

Guanine Count

1038655 bp

Cytosine Count

1012183 bp

Genome Length

3879021 bp

Protein-coding Genes

3424 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
livcs family branched-chain amino acid:cation transporterEDC54_101212Not AvailablePositive243986 - 24530546384.0
proline:proton symporter (aat family)EDC54_101213Not AvailablePositive245431 - 24680750156.8
miniconductance mechanosensitive channelEDC54_101214Not AvailableNegative246868 - 24814247281.4
peroxiredoxin (alkyl hydroperoxide reductase subunit c)EDC54_101215Not AvailableNegative248355 - 24895722174.5
acyl carrier protein phosphodiesteraseEDC54_101216Not AvailableNegative249159 - 24974022652.3
s-adenosylmethionine:trna ribosyltransferase-isomeraseEDC54_101217Not AvailablePositive249927 - 25099439304.8
pp_00210EDC54_101218Not AvailablePositive251089 - 252234Not Available
protein translocase subunit yajcEDC54_101219Not AvailablePositive252345 - 25267711828.7
preprotein translocase subunit secdEDC54_101220Not AvailablePositive252738 - 25455265062.2
protein translocase subunit secfEDC54_101221Not AvailablePositive254563 - 25553135246.5

Displaying genes 321 – 330 of 3588 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.