Paraburkholderia sacchari str. LMG 19450

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia sacchari
StrainLMG 19450

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Paraburkholderia sacchari str. LMG 19450
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia sacchari strain LMG 19450 ctg_21, whole genome

Gene Summary

Adenine Count

1308559 bp

Thymine Count

1324687 bp

Guanine Count

2378858 bp

Cytosine Count

2305504 bp

Genome Length

7317626 bp

Protein-coding Genes

6355 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
winged helix-turn-helix transcriptional regulatorNH14_007800Not AvailableNegative1753556 - 175419423258.9
glutamate--cysteine ligaseNH14_007805Not AvailableNegative1754868 - 175598341666.8
sodium:proton exchangerNH14_007810Not AvailableNegative1756079 - 175728443517.8
bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmcNH14_007815Not AvailableNegative1758127 - 176017873646.5
hu family dna-binding proteinNH14_007820Not AvailablePositive1760613 - 17608919591.59
gtp-binding proteinNH14_007825Not AvailableNegative1760967 - 176228048031.8
lytic transglycosylase domain-containing proteinNH14_007830Not AvailableNegative1762446 - 176288916432.9
type ii secretion system secretin gspdNH14_007835Not AvailablePositive1763399 - 176576881818.8
type ii secretion system atpase gspeNH14_007840Not AvailablePositive1765771 - 176727954658.5
type ii secretion system inner membrane protein gspfNH14_007845Not AvailablePositive1767307 - 176852444028.6

Displaying genes 1521 – 1530 of 6418 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

65 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001864Cr(6+)CrChemical structure of Cr(6+)Not available
Average51.9961Da
Monoisotopic51.9405119Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002243S-methyl-5'-thioinosineC11H14N4O4SChemical structure of S-methyl-5'-thioinosineNot available
Average298.32Da
Monoisotopic298.0735761Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da

Displaying 1–10 of 65 metabolites

Health Effects

No health effects information available for this bacterium.