Sphaerochaeta pleomorpha str. Grapes

sphereanaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Sphaerochaetaceae

Genus

Sphaerochaeta

Description

Sphaerochaeta pleomorpha strain Grapes is a Gram-negative, anaerobic bacterium characterized by its spherical shape and optimal growth temperature of 29.0°C. This species belongs to a group of microorganisms that thrive in low-oxygen environments, which may suggest its adaptation to specific ecological niches where oxygen availability is limited. The Gram-negative nature of S. pleomorpha implies the presence of a thin peptidoglycan layer surrounded by an outer membrane, which can influence its interactions with other microorganisms and its overall stability in various environments. The spherical morphology of this microbe may confer advantages in certain ecological contexts, such as buoyancy in liquid environments or enhanced nutrient uptake in biofilms. Understanding the growth conditions and morphological characteristics of S. pleomorpha str. Grapes can provide insights into its potential role in anaerobic ecosystems, such as those found in deep-sea sediments or within the digestive systems of certain organisms. The optimal temperature of 29.0°C suggests that this microbe may be well-suited to habitats that experience moderate thermal conditions, which could include various natural and anthropogenic environments. In summary, Sphaerochaeta pleomorpha str. Grapes exemplifies how specific traits can reflect an organism's ecological adaptations, particularly in anaerobic settings where it may contribute to biogeochemical cycles or interact with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySphaerochaetaceae
GenusSphaerochaeta
SpeciesSphaerochaeta pleomorpha
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphaerochaeta pleomorpha str. Grapes

Accession NumberNC_016633.1

Gene Summary

Adenine Count

968523 bp

Thymine Count

963453 bp

Guanine Count

831653 bp

Cytosine Count

827224 bp

Genome Length

3590853 bp

Protein-coding Genes

3191 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
phage tail tube proteinSPIGRAPES_RS14055Not Available-3087667 - 308862633123.6
hypothetical proteinSPIGRAPES_RS14060Not Available-3088650 - 308910817073.6
hypothetical proteinSPIGRAPES_RS14065Not Available-3089105 - 308962319231.4
hypothetical proteinSPIGRAPES_RS16680Not Available-3089625 - 309017020134.9
head fiber proteinSPIGRAPES_RS14075Not Available-3090251 - 30904998501.15
Phage major capsid proteinSPIGRAPES_RS14080Not Available-3090512 - 309171444217.9
Putative clp peptidaseSPIGRAPES_RS14085Q28NI7-3091726 - 309245426940.2
Portal proteinSPIGRAPES_RS14090P49859-3092387 - 309371549362.5
Terminase large subunitSPIGRAPES_RS14095P59217-3093734 - 309533560715.9
hypothetical proteinSPIGRAPES_RS14100Not Available-3095407 - 30956318596.27

Displaying genes 1 – 10 of 3269 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

182 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000538D-arabinonateC5H9O6Chemical structure of D-arabinonateNot available
Average165.122Da
Monoisotopic165.04046159Da
BASm00007052-dehydro-3-deoxy-D-arabinonateC5H7O5Chemical structure of 2-dehydro-3-deoxy-D-arabinonateNot available
Average147.107Da
Monoisotopic147.0298969Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm0000837dimethylmaleateC6H6O4Chemical structure of dimethylmaleateNot available
Average142.111Da
Monoisotopic142.027705833Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000899N-isopropylammelideC6H10N4O2Chemical structure of N-isopropylammelideNot available
Average170.172Da
Monoisotopic170.0803756Da
BASm00009123-(indol-3-yl)lactateC11H10NO3Chemical structure of 3-(indol-3-yl)lactateNot available
Average204.206Da
Monoisotopic204.0666168Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da

Displaying 11–20 of 182 metabolites