Pseudomonas parafulva str. NS212

Motileaerobic

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	aerobic
Optimal temperature	30
Temperature range	Not Available
Habitat	Japanese unhulled rice; rice paddy samples
Biotic relationship	Not Available
Host(s)	Oryza sativa
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Not Available
Pathogenicity	Non-pathogenic

Pseudomonas parafulva strain NS212 contig_147, whole genome

Adenine Count

919878 bp

Thymine Count

922620 bp

Guanine Count

1494220 bp

Cytosine Count

1486813 bp

Genome Length

4823531 bp

Protein-coding Genes

4207 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
hypothetical protein	NS212_18595	Not Available	Positive	4123129 - 4123389	9179.99
hypothetical protein	NS212_18600	Not Available	Positive	4123405 - 4123688	10497.7
hydrolase tatd	NS212_18605	Not Available	Negative	4123729 - 4124511	28410.8
dna polymerase iii subunit delta'	NS212_18610	Not Available	Negative	4124539 - 4125525	36676.6
thymidylate kinase	NS212_18615	Not Available	Negative	4125518 - 4126150	22871.4
aminodeoxychorismate lyase	NS212_18620	Not Available	Negative	4126160 - 4127353	44381.0
4-amino-4-deoxychorismate lyase	NS212_18625	Not Available	Negative	4127358 - 4128173	29556.9
3-oxoacyl-acp synthase	NS212_18630	Not Available	Negative	4128173 - 4129417	43182.4
acyl carrier protein	NS212_18635	Not Available	Negative	4129605 - 4129841	8729.06
3-ketoacyl-acp reductase	NS212_18640	Not Available	Negative	4130045 - 4130785	25489.6

Displaying genes 3601 – 3610 of 4207 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6	Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0000908	propanoateC3H5O2	Not available	Average73.072Da Monoisotopic73.029502981Da
BASm0001279	(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6	Not available	Average457.4399Da Monoisotopic457.1709815Da
BASm0001717	fumarateC4H2O4	Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001865	diphosphateHO7P2	Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0002026	acrylateC3H3O2	`10344-93-1`	Average71.056Da Monoisotopic71.013852917Da
BASm0002963	meso-2,6-diaminoheptanedioateC7H14N2O4	`922-54-3`	Average190.1971Da Monoisotopic190.0953569Da
BASm0003276	S-(5-deoxy-D-ribos-5-yl)-L-homocysteineC9H17NO6S	`15912-98-8`	Average267.299Da Monoisotopic267.077658Da
BASm0003351	4-methyl-5-(2-phosphooxyethyl)-thiazoleC6H8NO4PS	Not available	Average221.17Da Monoisotopic220.9922631Da
BASm0003389	NADP(+)C21H25N7O17P3	Not available	Average740.386Da Monoisotopic740.053624107Da