Pseudomonas parafulva str. NS212

Motileaerobic

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	aerobic
Optimal temperature	30
Temperature range	Not Available
Habitat	Japanese unhulled rice; rice paddy samples
Biotic relationship	Not Available
Host(s)	Oryza sativa
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Not Available
Pathogenicity	Non-pathogenic

Pseudomonas parafulva strain NS212 contig_147, whole genome

Adenine Count

919878 bp

Thymine Count

922620 bp

Guanine Count

1494220 bp

Cytosine Count

1486813 bp

Genome Length

4823531 bp

Protein-coding Genes

4207 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
magnesium transporter	NS212_17565	Not Available	Negative	3893745 - 3895187	53480.8
carbon storage regulator	NS212_17590	Not Available	Negative	3896222 - 3896410	6902.48
aspartate kinase	NS212_17595	Not Available	Negative	3896577 - 3897812	44592.7
alanyl-trna synthetase	NS212_17600	Not Available	Negative	3897931 - 3900555	94587.9
hypothetical protein	NS212_17605	Not Available	Positive	3900898 - 3902085	42565.0
hypothetical protein	NS212_17610	Not Available	Positive	3902216 - 3903049	30232.4
succinylglutamate desuccinylase	NS212_17615	Not Available	Negative	3903053 - 3904060	37038.6
topoisomerase ii	NS212_17620	Not Available	Negative	3904072 - 3904362	10709.5
n-succinylarginine dihydrolase	NS212_17625	Not Available	Negative	3904376 - 3905725	48951.8
succinylglutamate-semialdehyde dehydrogenase	NS212_17630	Not Available	Negative	3905746 - 3907209	51374.2

Displaying genes 3401 – 3410 of 4207 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6	Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0000908	propanoateC3H5O2	Not available	Average73.072Da Monoisotopic73.029502981Da
BASm0001279	(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6	Not available	Average457.4399Da Monoisotopic457.1709815Da
BASm0001717	fumarateC4H2O4	Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001865	diphosphateHO7P2	Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0002026	acrylateC3H3O2	`10344-93-1`	Average71.056Da Monoisotopic71.013852917Da
BASm0002963	meso-2,6-diaminoheptanedioateC7H14N2O4	`922-54-3`	Average190.1971Da Monoisotopic190.0953569Da
BASm0003276	S-(5-deoxy-D-ribos-5-yl)-L-homocysteineC9H17NO6S	`15912-98-8`	Average267.299Da Monoisotopic267.077658Da
BASm0003351	4-methyl-5-(2-phosphooxyethyl)-thiazoleC6H8NO4PS	Not available	Average221.17Da Monoisotopic220.9922631Da
BASm0003389	NADP(+)C21H25N7O17P3	Not available	Average740.386Da Monoisotopic740.053624107Da