Pseudomonas parafulva str. NS212

Motileaerobic

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	aerobic
Optimal temperature	30
Temperature range	Not Available
Habitat	Japanese unhulled rice; rice paddy samples
Biotic relationship	Not Available
Host(s)	Oryza sativa
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Not Available
Pathogenicity	Non-pathogenic

Pseudomonas parafulva strain NS212 contig_147, whole genome

Adenine Count

919878 bp

Thymine Count

922620 bp

Guanine Count

1494220 bp

Cytosine Count

1486813 bp

Genome Length

4823531 bp

Protein-coding Genes

4207 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
udp-n-acetylglucosamine 1-carboxyvinyltransferase	NS212_10910	Not Available	Positive	2294349 - 2295614	44788.6
atp phosphoribosyltransferase catalytic subunit	NS212_10915	Not Available	Positive	2295736 - 2296371	23055.3
histidinol dehydrogenase	NS212_10920	Not Available	Positive	2296498 - 2297823	47579.6
histidinol-phosphate aminotransferase	NS212_10925	Not Available	Positive	2297826 - 2298872	38442.9
mfs transporter	NS212_10930	Not Available	Positive	2298994 - 2300274	44399.6
ketosteroid isomerase	NS212_10935	Not Available	Positive	2300350 - 2300835	18342.7
hypothetical protein	NS212_10940	Not Available	Negative	2300814 - 2301686	32518.0
giy-yig nuclease	NS212_10945	Not Available	Positive	2301741 - 2302058	11751.0
nucleoid-associated protein	NS212_10950	Not Available	Negative	2302039 - 2303046	37563.2
dipicolinate synthase	NS212_10955	Not Available	Positive	2303418 - 2303699	9673.83

Displaying genes 2111 – 2120 of 4207 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6	Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0000908	propanoateC3H5O2	Not available	Average73.072Da Monoisotopic73.029502981Da
BASm0001279	(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6	Not available	Average457.4399Da Monoisotopic457.1709815Da
BASm0001717	fumarateC4H2O4	Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001865	diphosphateHO7P2	Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0002026	acrylateC3H3O2	`10344-93-1`	Average71.056Da Monoisotopic71.013852917Da
BASm0002963	meso-2,6-diaminoheptanedioateC7H14N2O4	`922-54-3`	Average190.1971Da Monoisotopic190.0953569Da
BASm0003276	S-(5-deoxy-D-ribos-5-yl)-L-homocysteineC9H17NO6S	`15912-98-8`	Average267.299Da Monoisotopic267.077658Da
BASm0003351	4-methyl-5-(2-phosphooxyethyl)-thiazoleC6H8NO4PS	Not available	Average221.17Da Monoisotopic220.9922631Da
BASm0003389	NADP(+)C21H25N7O17P3	Not available	Average740.386Da Monoisotopic740.053624107Da