Azospirillum sp. B510

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Azospirillum

Description

Azospirillum sp. B510 is a rice endophyte isolated in August 1999 from the surface-sterilized stems of rice plants (Oryza sativa cv. Nipponbare) cultivated in an experimental paddy field in Japan. In addition to being a diazotroph under free-living conditions, B510 was found to have positive motility, and to be capable of degrading plant cell walls. B510 is capable of colonizing internal rice tissues, and inoculation with B510 was shown to promote plant growth under both laboratory and field conditions. It is capable of fixing N(2) in planta. B510 inoculation increases stem number resulting in an increase in seed yield. The genome consists of 1 chromosome and 6 plasmids, 2 of which encode essential genes. There are 280 insertions sequences and at least 2 putative prophages in the genome. Three putative plant hormone-related genes encoding tryptophan 2-monooxytenase (iaaM) and indole-3-acetaldehyde hydrolase (iaaH), which are involved in indole-3-actic acid biosynthesis, and 1-aminocyclopropane-1-carboxylate deaminase (acdS), which reduces ethylene levels, were identified. Moreover, B510 inoculation enhanced disease resistance to virulent rice blast fungus and the bacterial pathogen Xanthomonas oryzae.15 Thus, Azospirillum sp. B510 is likely a beneficial bacterium with agronomic applications (adapted from PMID 20047946). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusAzospirillum
SpeciesAzospirillum sp. B510
StrainB510

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Azospirillum sp. B510
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature34
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipSymbiotic
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Azospirillum sp. B510 plasmid pAB510f, complete sequence.

Gene Summary

Adenine Count

45049 bp

Thymine Count

44203 bp

Guanine Count

86790 bp

Cytosine Count

85554 bp

Genome Length

261596 bp

Protein-coding Genes

188 genes

Non-Coding Genes

10 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive2147576 - 2147587Not Available
Issod6, transposaseAZL_RS34140Not AvailablePositive2151418 - 215214027605.1
cyclic nucleotide-binding domain-containing proteinAZL_RS09925Not AvailablePositive2152190 - 21524449045.87
helix-turn-helix domain-containing proteinAZL_RS09930Not AvailablePositive2152419 - 21526769522.66
luxr c-terminal-related transcriptional regulatorAZL_RS37610Not AvailableNegative2152615 - 215327423541.3
hypothetical proteinAZL_RS09935Not AvailableNegative2153371 - 215382316488.7
Hypothetical proteinAZL_RS09940Not AvailableNegative2153841 - 215490538245.1
Hypothetical proteinAZL_RS09945Not AvailableNegative2155134 - 215602431041.9
helix-turn-helix domain-containing proteinAZL_RS35405Not AvailableNegative2156017 - 21562628913.54
Is1480 transposaseAZL_RS09955Not AvailablePositive2156705 - 215757733830.1

Displaying genes 901 – 910 of 6787 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003419trimethylamineC3H9NChemical structure of trimethylamine75-50-3
Average59.1103Da
Monoisotopic59.07349929Da
BASm0009318(3R)-3-hydroxy-4-oxobutanoateC4H5O4Chemical structure of (3R)-3-hydroxy-4-oxobutanoateNot available
Average117.081Da
Monoisotopic117.019332221Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.