Azospirillum sp. B510

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Azospirillum

Description

Azospirillum sp. B510 is a rice endophyte isolated in August 1999 from the surface-sterilized stems of rice plants (Oryza sativa cv. Nipponbare) cultivated in an experimental paddy field in Japan. In addition to being a diazotroph under free-living conditions, B510 was found to have positive motility, and to be capable of degrading plant cell walls. B510 is capable of colonizing internal rice tissues, and inoculation with B510 was shown to promote plant growth under both laboratory and field conditions. It is capable of fixing N(2) in planta. B510 inoculation increases stem number resulting in an increase in seed yield. The genome consists of 1 chromosome and 6 plasmids, 2 of which encode essential genes. There are 280 insertions sequences and at least 2 putative prophages in the genome. Three putative plant hormone-related genes encoding tryptophan 2-monooxytenase (iaaM) and indole-3-acetaldehyde hydrolase (iaaH), which are involved in indole-3-actic acid biosynthesis, and 1-aminocyclopropane-1-carboxylate deaminase (acdS), which reduces ethylene levels, were identified. Moreover, B510 inoculation enhanced disease resistance to virulent rice blast fungus and the bacterial pathogen Xanthomonas oryzae.15 Thus, Azospirillum sp. B510 is likely a beneficial bacterium with agronomic applications (adapted from PMID 20047946). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusAzospirillum
SpeciesAzospirillum sp. B510
StrainB510

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Azospirillum sp. B510
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature34
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipSymbiotic
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Azospirillum sp. B510 plasmid pAB510f, complete sequence.

Gene Summary

Adenine Count

45049 bp

Thymine Count

44203 bp

Guanine Count

86790 bp

Cytosine Count

85554 bp

Genome Length

261596 bp

Protein-coding Genes

188 genes

Non-Coding Genes

10 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-dehydroquinate synthaseAZL_RS00460Not AvailableNegative89897 - 9104240350.4
shikimate kinaseAZL_RS00465Not AvailableNegative91107 - 9179324588.6
hypothetical proteinAZL_RS36550Not AvailablePositive92229 - 923695158.51
hypothetical proteinAZL_RS00470Not AvailablePositive92401 - 9432064479.5
site-specific tyrosine recombinase xerdAZL_RS00475Not AvailablePositive94363 - 9543037921.9
polyhydroxyalkanoic acid system family proteinAZL_RS00480Not AvailableNegative95603 - 9591411433.0
4a-hydroxytetrahydrobiopterin dehydrataseAZL_RS00485Not AvailableNegative95987 - 9628911474.5
metallopeptidase family proteinAZL_RS00490Not AvailablePositive96431 - 9678113321.7
uracil-dna glycosylase family proteinAZL_RS00495Not AvailableNegative96812 - 9742322372.9
sir2 family nad+-dependent deacetylaseAZL_RS00500Not AvailableNegative97413 - 9815627074.2

Displaying genes 1101 – 1110 of 6787 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003419trimethylamineC3H9NChemical structure of trimethylamine75-50-3
Average59.1103Da
Monoisotopic59.07349929Da
BASm0009318(3R)-3-hydroxy-4-oxobutanoateC4H5O4Chemical structure of (3R)-3-hydroxy-4-oxobutanoateNot available
Average117.081Da
Monoisotopic117.019332221Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.