Weissella cibaria str. DmW_103

Gram-negativeFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella cibaria str. DmW_103 is a Gram-negative, facultative anaerobic bacterium that has been isolated from various habitats, including Korean kimchi, tropical fruits, pasture, saliva, and soil. This microbe is part of the diverse microbiota associated with fermented foods, particularly those prevalent in Korean cuisine, where it may play a role in the fermentation process of kimchi. Its ability to thrive in both aerobic and anaerobic conditions suggests a versatile metabolic capacity that allows it to adapt to different environmental niches. The presence of Weissella cibaria str. DmW_103 in diverse habitats, such as the human saliva and the fermentation of tropical fruits, indicates its potential significance in both food production and oral microbiology. The bacterium may contribute to the flavor and texture profiles of fermented products, while its presence in the oral cavity highlights its role in the complex dynamics of the oral microbiome. This adaptability could provide insights into its functional roles in fermentation and health, emphasizing the importance of microbial diversity in both ecological and dietary contexts. Understanding the specific contributions of Weissella cibaria str. DmW_103 may further elucidate its significance in fermentation science and its interactions within various ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella cibaria
StrainDmW_103

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatChili Bo; Korean kimchi; pasture; saliva; soil; tropical fruits
Biotic relationshipNot Available
Host(s)Homo sapiens, Brassica oleracea var. capitata, Vicia faba
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Weissella cibaria strain DmW_103 NODE_34_length_575_cov_12.669565,

Gene Summary

Adenine Count

680634 bp

Thymine Count

675367 bp

Guanine Count

568674 bp

Cytosine Count

540937 bp

Genome Length

2465612 bp

Protein-coding Genes

2159 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-2B9D04_03650Not AvailablePositive721289 - 72353281303.4
ribosome-binding factor aB9D04_03655Not AvailablePositive723558 - 72391413312.0
trna pseudouridine(55) synthase trubB9D04_03660Not AvailablePositive723988 - 72489933559.1
fad-dependent oxidoreductaseB9D04_03665Not AvailablePositive725082 - 72630544047.6
deoxyribonucleaseB9D04_03670Not AvailablePositive726382 - 72758142282.6
riboflavin biosynthesis protein ribfB9D04_03675Not AvailablePositive727736 - 72867734213.6
hypothetical proteinB9D04_03680Not AvailablePositive728704 - 73041064707.5
copper homeostasis protein cutcB9D04_03685Not AvailablePositive730579 - 73123223913.2
marr family transcriptional regulatorB9D04_03690Not AvailablePositive731309 - 73172515720.0
alkaline phosphatase family proteinB9D04_03695Not AvailablePositive731739 - 73303448493.7

Displaying genes 781 – 790 of 2319 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.