Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage integrase | SAMIE_RS00565 | Not Available | Positive | 107120 - 108331 | 44109.2 |
| Putative tape measure protein | SAMIE_RS00570 | Not Available | Negative | 108424 - 109080 | 23165.7 |
| Dna primase | SAMIE_RS00575 | Not Available | Positive | 109206 - 110102 | 32130.4 |
| Darb-like antirestriction protein | SAMIE_RS00580 | Not Available | Positive | 110178 - 112394 | 79426.2 |
| Tyrosine-type recombinase/integrase | SAMIE_RS00585 | Not Available | Positive | 112485 - 113717 | 46498.3 |
| Gp37 | SAMIE_RS00590 | Not Available | Positive | 113714 - 115069 | 52346.4 |
| Tyrosine-type recombinase/integrase | SAMIE_RS00595 | Not Available | Positive | 115066 - 116070 | 37535.1 |
| methylase | SAMIE_RS24070 | Not Available | Positive | 116155 - 116481 | 11526.8 |
| hypothetical protein | SAMIE_RS00605 | Not Available | Positive | 116730 - 117779 | 36972.6 |
| Transposase/is protein | SAMIE_RS00610 | Not Available | Negative | 117868 - 118638 | 28135.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
