Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Is21 transposase | SAMIE_RS00615 | Not Available | Negative | 118628 - 120154 | 57698.5 |
| tyrosine-type recombinase/integrase | SAMIE_RS00620 | Not Available | Negative | 120269 - 120724 | 17414.3 |
| Tyrosine recombinase xerd-like protein | SAMIE_RS00625 | Not Available | Negative | 120721 - 121635 | 33954.9 |
| Integrase | SAMIE_RS00630 | Not Available | Negative | 121629 - 123176 | 58316.3 |
| strawberry notch c-terminal domain-containing protein | SAMIE_RS00635 | Not Available | Positive | 123386 - 125113 | 63706.5 |
| mbca/pars/xre antitoxin family protein | SAMIE_RS00640 | Not Available | Positive | 125133 - 125546 | 15209.3 |
| res family nad+ phosphorylase | SAMIE_RS00645 | Not Available | Positive | 125543 - 126265 | 26016.6 |
| slatt domain-containing protein | SAMIE_RS00650 | Not Available | Negative | 126267 - 126851 | 22225.6 |
| nucleotide-binding domain-containing protein | SAMIE_RS00655 | Not Available | Negative | 126844 - 127998 | 44035.4 |
| transposase | SAMIE_RS00660 | Not Available | Positive | 128117 - 128266 | 5227.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
