Sphingobium xenophagum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium xenophagum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium xenophagum OW59 DNA, contig: OW59_C105, whole genome

Gene Summary

Adenine Count

859502 bp

Thymine Count

870348 bp

Guanine Count

1474864 bp

Cytosine Count

1440440 bp

Genome Length

4645154 bp

Protein-coding Genes

4447 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Large packaging proteinMBESOW_P1678Not AvailablePositive1730493 - 173181247167.7
hypothetical proteinMBESOW_P1679Not AvailablePositive1731875 - 173221311203.9
Portal proteinMBESOW_P1680Not AvailablePositive1732515 - 173363639056.0
Hypothetical proteinMBESOW_P1681Not AvailablePositive1733695 - 173401811490.4
Putative prohead proteaseMBESOW_P1682Not AvailablePositive1734015 - 173462321331.4
hypothetical proteinMBESOW_P1683Not AvailableNegative1734685 - 173535323711.5
Putative major capsid proteinMBESOW_P1684Not AvailablePositive1735535 - 173665338805.7
Minor tail proteinMBESOW_P1685Not AvailablePositive1736800 - 17370789748.48
hypothetical proteinMBESOW_P1686Not AvailablePositive1737072 - 173761419180.1
hypothetical proteinMBESOW_P1687Not AvailablePositive1737611 - 17378026823.3

Displaying genes 1 – 10 of 4511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm00038332-hydroxychromene-2-carboxylateC10H7O4Not availableNot available
Average191.163Da
Monoisotopic191.034982285Da
BASm0003834(3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoateC10H7O4Chemical structure of (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoateNot available
Average191.163Da
Monoisotopic191.034982285Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0040130Pseudomonas sp. C18Not availableNot availableNot available

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.