Pandoraea apista

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Pandoraea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPandoraea
SpeciesPandoraea apista
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pandoraea apista genome assembly Pandoraea assembly 1, contig

Gene Summary

Adenine Count

1034326 bp

Thymine Count

1032319 bp

Guanine Count

1721684 bp

Cytosine Count

1749063 bp

Genome Length

5537404 bp

Protein-coding Genes

4974 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxoglutaramate amidaseLMG16407_00781P55175Positive889382 - 89026632074.2
protease tlddLMG16407_00782P0AGG9Positive890320 - 89178051470.5
phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitiveLMG16407_00783P0AB92Positive892283 - 89335638865.4
cob(i)yrinic acid a,c-diamide adenosyltransferaseLMG16407_00784Q1LJ80Negative893494 - 89405720183.3
putative fad-linked oxidoreductaseLMG16407_00785F1QXM5Positive894399 - 89582051079.0
putative fad-linked oxidoreductaseLMG16407_00786P0AEQ0Positive895828 - 89736354604.7
cyclic nucleotide-gated potassium channelLMG16407_00787Q02006Positive897365 - 89823431905.7
putative fad-linked oxidoreductaseLMG16407_00788P52073Positive898234 - 89931638772.6
putative hth-type transcriptional regulator yjirLMG16407_00789P39389Negative899327 - 90088356435.8
hypothetical proteinLMG16407_00790Not AvailablePositive901042 - 90150616760.2

Displaying genes 811 – 820 of 5057 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

342 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000198tetracenomycin CC23H20O11Chemical structure of tetracenomycin CNot available
Average472.402Da
Monoisotopic472.100561464Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da

Displaying 1–10 of 342 metabolites

Health Effects

No health effects information available for this bacterium.