Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | subsp. aurantiaca |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292452 bp
Thymine Count
1293592 bp
Guanine Count
2186047 bp
Cytosine Count
2189977 bp
Genome Length
6962068 bp
Protein-coding Genes
6089 genes
Non-Coding Genes
209 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing sensor histidine kinase | C4K22_RS03470 | Not Available | Negative | 778304 - 781072 | 103408.0 |
| tade/tadg family type iv pilus assembly protein | C4K22_RS03475 | Not Available | Negative | 781069 - 781515 | 15971.5 |
| prepilin peptidase | C4K22_RS03480 | Not Available | Positive | 781591 - 782061 | 16695.1 |
| response regulator transcription factor | C4K22_RS03485 | Not Available | Positive | 782186 - 782977 | 29264.2 |
| type ii secretion system f family protein | C4K22_RS03490 | Not Available | Negative | 783076 - 783963 | 32704.1 |
| type ii secretion system f family protein | C4K22_RS03495 | Not Available | Negative | 783965 - 784849 | 32667.9 |
| cpaf family protein | C4K22_RS03500 | Not Available | Negative | 784868 - 786142 | 47141.2 |
| aaa family atpase | C4K22_RS03505 | Not Available | Negative | 786139 - 787329 | 42993.0 |
| hypothetical protein | C4K22_RS31620 | Not Available | Negative | 787326 - 787493 | 6060.12 |
| flp pilus assembly protein cpab | C4K22_RS03510 | Not Available | Negative | 787514 - 788452 | 33222.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
