Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | subsp. aurantiaca |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292452 bp
Thymine Count
1293592 bp
Guanine Count
2186047 bp
Cytosine Count
2189977 bp
Genome Length
6962068 bp
Protein-coding Genes
6089 genes
Non-Coding Genes
209 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1097 domain-containing protein | C4K22_RS01395 | Not Available | Negative | 315034 - 315543 | 17531.8 |
| sdr family oxidoreductase | C4K22_RS01400 | Not Available | Negative | 315577 - 316317 | 25951.1 |
| lysr family transcriptional regulator | C4K22_RS01405 | Not Available | Positive | 316456 - 317346 | 33255.3 |
| type ii toxin-antitoxin system hica family toxin | C4K22_RS01410 | Not Available | Positive | 317471 - 317653 | 6874.43 |
| type ii toxin-antitoxin system hicb family antitoxin | C4K22_RS01415 | Not Available | Positive | 317683 - 318084 | 14597.2 |
| laci family dna-binding transcriptional regulator | C4K22_RS01420 | Not Available | Negative | 318184 - 319230 | 37732.2 |
| tonb-dependent receptor | C4K22_RS01425 | Not Available | Positive | 319438 - 321696 | 81989.9 |
| llm class flavin-dependent oxidoreductase | C4K22_RS01430 | Not Available | Positive | 321743 - 323068 | 48151.8 |
| l-glyceraldehyde 3-phosphate reductase | C4K22_RS01435 | Not Available | Positive | 323153 - 324190 | 38052.1 |
| type ii toxin-antitoxin system vapc family toxin | C4K22_RS01440 | Not Available | Negative | 324319 - 324747 | 15854.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
