Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | subsp. aurantiaca |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292452 bp
Thymine Count
1293592 bp
Guanine Count
2186047 bp
Cytosine Count
2189977 bp
Genome Length
6962068 bp
Protein-coding Genes
6089 genes
Non-Coding Genes
209 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C4K22_RS01190 | Not Available | Negative | 269018 - 269293 | 10230.4 |
| cpcc family cysteine-rich protein | C4K22_RS01195 | Not Available | Negative | 269883 - 270413 | 20133.7 |
| rhs repeat-associated core domain-containing protein | C4K22_RS01200 | Not Available | Negative | 270415 - 275070 | 173117.0 |
| duf4123 domain-containing protein | C4K22_RS01205 | Not Available | Negative | 275070 - 275807 | 27989.2 |
| type vi secretion system tip protein tssi/vgrg | C4K22_RS01210 | Not Available | Negative | 275797 - 277839 | 75894.2 |
| hcp family type vi secretion system effector | C4K22_RS01215 | Not Available | Negative | 277974 - 278492 | 19110.3 |
| cynx/nimt family mfs transporter | C4K22_RS01220 | Not Available | Negative | 278805 - 280034 | 43804.9 |
| nucleoside deaminase | C4K22_RS01225 | Not Available | Negative | 280021 - 280482 | 16494.8 |
| ankyrin repeat domain-containing protein | C4K22_RS01230 | Not Available | Negative | 280505 - 281164 | 23012.0 |
| lysr family transcriptional regulator | C4K22_RS01235 | Not Available | Positive | 281274 - 282131 | 31247.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
