Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | subsp. aurantiaca |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292452 bp
Thymine Count
1293592 bp
Guanine Count
2186047 bp
Cytosine Count
2189977 bp
Genome Length
6962068 bp
Protein-coding Genes
6089 genes
Non-Coding Genes
209 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | C4K22_RS00740 | Not Available | Positive | 171116 - 171982 | 31664.6 |
| lysr family transcriptional regulator | C4K22_RS00750 | Not Available | Positive | 172566 - 173483 | 34087.4 |
| mfs transporter | C4K22_RS00755 | Not Available | Positive | 173772 - 175316 | 55026.3 |
| hlyd family secretion protein | C4K22_RS00760 | Not Available | Positive | 175342 - 176400 | 37291.9 |
| efflux transporter outer membrane subunit | C4K22_RS00765 | Not Available | Positive | 176397 - 177845 | 52427.8 |
| nyn domain-containing protein | C4K22_RS00770 | Not Available | Negative | 177852 - 178541 | 25786.2 |
| duf3142 domain-containing protein | C4K22_RS00775 | Not Available | Negative | 178778 - 179524 | 28277.8 |
| outer membrane assembly lipoprotein yfio | C4K22_RS00780 | Not Available | Negative | 179527 - 181689 | 78769.0 |
| efflux rnd transporter periplasmic adaptor subunit | C4K22_RS00785 | Not Available | Positive | 181931 - 182719 | 27681.0 |
| efflux rnd transporter periplasmic adaptor subunit | C4K22_RS00790 | Not Available | Positive | 182716 - 184035 | 47958.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
