Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas chlororaphis |
| Strain | subsp. aurantiaca |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292452 bp
Thymine Count
1293592 bp
Guanine Count
2186047 bp
Cytosine Count
2189977 bp
Genome Length
6962068 bp
Protein-coding Genes
6089 genes
Non-Coding Genes
209 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine protease lapg | C4K22_RS00685 | Not Available | Positive | 143261 - 143950 | 26095.4 |
| cyclic di-gmp receptor lapd | C4K22_RS00690 | Not Available | Positive | 143965 - 145911 | 71824.5 |
| tryptophan synthase subunit beta | C4K22_RS00695 | Not Available | Negative | 145952 - 146290 | 12499.9 |
| lapa family giant adhesin | C4K22_RS00700 | Not Available | Negative | 146438 - 162679 | 533213.0 |
| tolc family outer membrane protein | C4K22_RS00705 | Not Available | Positive | 163038 - 164387 | 50032.2 |
| type i secretion system permease/atpase | C4K22_RS00710 | Not Available | Positive | 164426 - 166582 | 78471.6 |
| hlyd family type i secretion periplasmic adaptor subunit | C4K22_RS00715 | Not Available | Positive | 166572 - 167939 | 50640.3 |
| taud/tfda dioxygenase family protein | C4K22_RS00725 | Not Available | Positive | 168274 - 169164 | 33146.4 |
| abc transporter substrate-binding protein | C4K22_RS00730 | Not Available | Positive | 169192 - 170229 | 37584.8 |
| abc transporter atp-binding protein | C4K22_RS00735 | Not Available | Positive | 170235 - 171095 | 31920.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
