Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472813 bp
Thymine Count
1468197 bp
Guanine Count
950399 bp
Cytosine Count
973739 bp
Genome Length
4865148 bp
Protein-coding Genes
3744 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | UB36_00255 | Not Available | Positive | 60635 - 61102 | 17702.6 |
| xre family transcriptional regulator | UB36_00265 | Not Available | Negative | 63443 - 63991 | 20688.5 |
| benzoate transporter | UB36_00270 | Not Available | Positive | 64119 - 65300 | 42443.2 |
| bcct transporter | UB36_00275 | Not Available | Positive | 65603 - 67195 | 57764.9 |
| hypothetical protein | UB36_00280 | Not Available | Positive | 67402 - 67617 | 8315.72 |
| transporter | UB36_00290 | Not Available | Positive | 68898 - 69317 | 16114.0 |
| hypothetical protein | UB36_00295 | Not Available | Positive | 69566 - 69925 | 14065.3 |
| fmn-dependent nadh-azoreductase | UB36_00300 | Not Available | Negative | 70036 - 70614 | 20814.2 |
| pirin | UB36_00305 | Not Available | Negative | 70673 - 71368 | 25699.4 |
| oxidoreductase | UB36_00310 | Not Available | Negative | 71392 - 71835 | 15663.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
