Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472813 bp
Thymine Count
1468197 bp
Guanine Count
950399 bp
Cytosine Count
973739 bp
Genome Length
4865148 bp
Protein-coding Genes
3744 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | UB36_00200 | Not Available | Positive | 49498 - 49734 | 8974.22 |
| mode family transcriptional regulator | UB36_00205 | Not Available | Negative | 49740 - 50540 | 28894.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 50745 - 50860 | Not Available |
| lactate dehydrogenase | UB36_00210 | Not Available | Negative | 50745 - 51914 | 43717.0 |
| hypothetical protein | UB36_00220 | Not Available | Negative | 54032 - 54418 | 14541.5 |
| hypothetical protein | UB36_00225 | Not Available | Negative | 54611 - 54829 | 8238.4 |
| threonine transporter rhtb | UB36_00230 | Not Available | Positive | 54873 - 55487 | 21809.4 |
| zn-dependent protease | UB36_00235 | Not Available | Negative | 55697 - 57040 | 48052.1 |
| peptidase c69 | UB36_00240 | Not Available | Negative | 57040 - 58425 | 49516.8 |
| hypothetical protein | UB36_00250 | Not Available | Negative | 59739 - 60275 | 20402.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
