Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472813 bp
Thymine Count
1468197 bp
Guanine Count
950399 bp
Cytosine Count
973739 bp
Genome Length
4865148 bp
Protein-coding Genes
3744 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase | UB36_00135 | Not Available | Positive | 33195 - 33623 | 15637.9 |
| pts sugar transporter subunit iia | UB36_00140 | Not Available | Positive | 33631 - 33867 | 8564.33 |
| membrane protein | UB36_00145 | Not Available | Positive | 34036 - 35079 | 37837.5 |
| rok family transcriptional regulator | UB36_00155 | Not Available | Positive | 36477 - 37391 | 32916.7 |
| mfs transporter | UB36_00160 | Not Available | Negative | 37450 - 38574 | 39804.6 |
| gtpase | UB36_00165 | Not Available | Negative | 39148 - 40104 | 36043.9 |
| asnc family transcriptional regulator | UB36_00170 | Not Available | Negative | 40352 - 40807 | 17362.1 |
| cys/met metabolism pyridoxal-phosphate-dependent enzyme | UB36_00175 | Not Available | Positive | 40949 - 42760 | 67106.4 |
| transporter | UB36_00180 | Not Available | Negative | 42940 - 44922 | 75040.6 |
| short-chain dehydrogenase | UB36_00195 | Not Available | Positive | 48464 - 49198 | 25969.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
