Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472813 bp
Thymine Count
1468197 bp
Guanine Count
950399 bp
Cytosine Count
973739 bp
Genome Length
4865148 bp
Protein-coding Genes
3744 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | UB36_03230 | Not Available | Negative | 670734 - 670967 | 8440.2 |
| Hypothetical protein | UB36_03235 | Not Available | Negative | 670936 - 671274 | 13124.9 |
| Lysozyme | UB36_03240 | Not Available | Negative | 671261 - 671839 | 20462.5 |
| Holin family hp1 | UB36_03245 | Not Available | Negative | 671826 - 672035 | 7820.65 |
| Tail tube protein | UB36_03250 | Not Available | Negative | 672032 - 672241 | 7662.89 |
| Tail tube protein | UB36_03255 | Not Available | Negative | 672250 - 672702 | 16357.4 |
| Tail fibers protein | UB36_03260 | Not Available | Negative | 672705 - 673820 | 40677.8 |
| Virion morphogenesis protein | UB36_03265 | Not Available | Negative | 673835 - 674497 | 25413.4 |
| Head completion/stabilization protein | UB36_03270 | Not Available | Negative | 674962 - 675390 | 15699.5 |
| Terminase endonuclease subunit | UB36_03275 | Not Available | Negative | 675494 - 676204 | 27507.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
