Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 89dp-OG16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative integrase | FD722_06600 | Not Available | Positive | 1493424 - 1494587 | 44792.3 |
| hypothetical | FD722_06605 | Not Available | Positive | 1494871 - 1495272 | 15512.4 |
| Hypothetical protein | FD722_06610 | Not Available | Negative | 1495724 - 1496065 | 13404.8 |
| Hypothetical protein | FD722_06615 | Not Available | Negative | 1496076 - 1496459 | 14443.4 |
| hypothetical protein | FD722_06620 | Not Available | Negative | 1496624 - 1496848 | 9039.8 |
| hypothetical protein | FD722_06625 | Not Available | Negative | 1496893 - 1497126 | 9064.11 |
| hypothetical protein | FD722_06630 | Not Available | Negative | 1497138 - 1497338 | 7375.81 |
| Hypothetical protein | FD722_06635 | Not Available | Positive | 1497482 - 1498657 | 44213.0 |
| Repressor ci | FD722_06640 | Not Available | Negative | 1498658 - 1499323 | 25029.8 |
| Putative repressor | FD722_06645 | Not Available | Positive | 1499424 - 1499681 | 9674.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
