Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 89dp-OG16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD722_00155 | Not Available | Negative | 23004 - 23564 | 21209.7 |
| hypothetical protein | FD722_00160 | Not Available | Negative | 23784 - 24341 | 21012.6 |
| ngrc | FD722_00165 | Not Available | Negative | 24424 - 25329 | 34719.6 |
| hypothetical protein | FD722_00170 | Not Available | Negative | 25415 - 25822 | 14599.3 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | FD722_00175 | Not Available | Negative | 25885 - 26118 | 8983.41 |
| 5'-deoxynucleotidase | FD722_00180 | Not Available | Negative | 26115 - 26954 | 30682.7 |
| hypothetical protein | FD722_00185 | Not Available | Negative | 27240 - 27422 | 6527.19 |
| hypothetical protein | FD722_00190 | Not Available | Negative | 27538 - 27786 | 9464.79 |
| hypothetical protein | FD722_00195 | Not Available | Negative | 27854 - 28285 | 16397.1 |
| Ncrna_class:other | Not Available | Not Available | Positive | 28867 - 29049 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
