Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 89dp-OG16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD722_00060 | Not Available | Positive | 7995 - 8198 | 7297.65 |
| hypothetical protein | FD722_00065 | Not Available | Positive | 8189 - 8410 | 8377.94 |
| plasmid recombination enzyme | FD722_00070 | Not Available | Negative | 8645 - 9631 | 37185.1 |
| hypothetical protein | FD722_00075 | Not Available | Positive | 9680 - 9916 | 8397.48 |
| nerd domain-containing protein | FD722_00080 | Not Available | Positive | 10433 - 11218 | 30144.6 |
| duf2913 family protein | FD722_00085 | Not Available | Negative | 11267 - 11878 | 23556.2 |
| hypothetical protein | FD722_00090 | Not Available | Positive | 12138 - 13088 | 35672.8 |
| hypothetical protein | FD722_00095 | Not Available | Positive | 13091 - 13579 | 18388.1 |
| hypothetical protein | FD722_00100 | Not Available | Negative | 13576 - 14364 | 28876.3 |
| integrase | FD722_00105 | Not Available | Negative | 14366 - 15334 | 36811.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
